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Temperature-dependent polymorphism of N-(4-fluorophenyl)-1,5-dimethyl-1H-imidazole-4-carboxamide 3-oxide: experimental and theoretical studies on intermolecular interactions in the crystal state

机译:N-(4-氟苯基)-1,5-二甲基-1H-咪唑-4-羧酰胺3-氧化物的温度依赖性多态性:晶体状态下分子间相互作用的实验和理论研究

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摘要

X-ray analysis of N-(4-fluorophenyl)-1,5-dimethyl-1H-imidazole-4-carboxamide 3-oxide reveals the temperature-dependent polymorphism associated with the crystallographic symmetry conversion. The observed crystal structure transformation corresponds to a symmetry reduction from I41 /a (I) to P43 (II) space groups. The phase transition mainly concerns the subtle but clearly noticeable reorganization of molecules in the crystal space, with the structure of individual molecules left almost unchanged. The Hirshfeld surface analysis shows that various intermolecular contacts play an important role in the crystal packing, revealing graphically the differences in spatial arrangements of the molecules in both polymorphs. The N-oxide oxygen atom acts as a formally negatively charged hydrogen bonding acceptor in intramolecular hydrogen bond of N–H…O− type. The combined crystallographic and theoretical DFT methods demonstrate that the observed intramolecular N-oxide N–H…O hydrogen bond should be classified as a very strong charge-assisted and closed-shell non-covalent interaction.
机译:X-射线分析的N-(4-氟苯基)-1,5-二甲基-1H-咪唑-4-羧酰胺3-氧化物揭示了与晶体对称转化有关的温度依赖性多态性。观察到的晶体结构转变对应于从I41 / a(I)到P43(II)空间基团的对称性降低。相变主要涉及晶体空间中分子的微妙但明显的重组,单个分子的结构几乎保持不变。 Hirshfeld表面分析表明,各种分子间接触在晶体堆积中起着重要作用,以图形方式揭示了两种多晶型物中分子空间排列的差异。 N-氧化物氧原子在N–H…O-型分子内氢键中作为带负电荷的氢键受体。结合晶体学和理论DFT方法证明,观察到的分子内N-氧化物N–H…O氢键应归类为非常强的电荷辅助和闭壳非共价相互作用。

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